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skills/brycewang-stanford/Auto-Empirical-Research-Skills/68-research-productivity-skills-markitdown

68-research-productivity-skills-markitdown

1
brycewang-stanford/Auto-Empirical-Research-Skills·Search & Data Extraction·Audit pending·Snapshot a9bab04afb31

Summary

This source did not publish a separate summary. Review SKILL.md before using the skill.

SKILL.md

MarkItDown

Overview

MarkItDown is a Python utility that converts various file formats into Markdown format, optimized for use with large language models and text analysis pipelines. It preserves document structure (headings, lists, tables, hyperlinks) while producing clean, token-efficient Markdown output.

When to Use This Skill

Use this skill when users request:

  • Converting documents to Markdown format
  • Extracting text from PDF, Word, PowerPoint, or Excel files
  • Performing OCR on images to extract text
  • Transcribing audio files to text
  • Extracting YouTube video transcripts
  • Processing HTML, EPUB, or web content to Markdown
  • Converting structured data (CSV, JSON, XML) to readable Markdown
  • Batch converting multiple files or ZIP archives
  • Preparing documents for LLM analysis or RAG systems

Core Capabilities

1. Document Conversion

Convert Office documents and PDFs to Markdown while preserving structure.

Supported formats:

  • PDF files (with optional Azure Document Intelligence integration)
  • Word documents (DOCX)
  • PowerPoint presentations (PPTX)
  • Excel spreadsheets (XLSX, XLS)

Basic usage:

from markitdown import MarkItDown

md = MarkItDown()
result = md.convert("document.pdf")
print(result.text_content)

Command-line:

markitdown document.pdf -o output.md

See references/document_conversion.md for detailed documentation on document-specific features.

2. Media Processing

Extract text from images using OCR and transcribe audio files to text.

Supported formats:

  • Images (JPEG, PNG, GIF, etc.) with EXIF metadata extraction
  • Audio files with speech transcription (requires speech_recognition)
  • Image with OCR:

    from markitdown import MarkItDown
    
    md = MarkItDown()
    result = md.convert("image.jpg")
    print(result.text_content)  # Includes EXIF metadata and OCR text
    

    Audio transcription:

    result = md.convert("audio.wav")
    print(result.text_content)  # Transcribed speech
    

    See references/media_processing.md for advanced media handling options.

    3. Web Content Extraction

    Convert web-based content and e-books to Markdown.

    Supported formats:

    • HTML files and web pages
    • YouTube video transcripts (via URL)
    • EPUB books
    • RSS feeds

    YouTube transcript:

    from markitdown import MarkItDown
    
    md = MarkItDown()
    result = md.convert("https://youtube.com/watch?v=VIDEO_ID")
    print(result.text_content)
    

    See references/web_content.md for web extraction details.

    4. Structured Data Handling

    Convert structured data formats to readable Markdown tables.

    Supported formats:

    • CSV files
    • JSON files
    • XML files

    CSV to Markdown table:

    from markitdown import MarkItDown
    
    md = MarkItDown()
    result = md.convert("data.csv")
    print(result.text_content)  # Formatted as Markdown table
    

    See references/structured_data.md for format-specific options.

    5. Advanced Integrations

    Enhance conversion quality with AI-powered features.

    Azure Document Intelligence: For enhanced PDF processing with better table extraction and layout analysis:

    from markitdown import MarkItDown
    
    md = MarkItDown(docintel_endpoint="<endpoint>", docintel_key="<key>")
    result = md.convert("complex.pdf")
    

    LLM-Powered Image Descriptions: Generate detailed image descriptions using GPT-4o:

    from markitdown import MarkItDown
    from openai import OpenAI
    
    client = OpenAI()
    md = MarkItDown(llm_client=client, llm_model="gpt-4o")
    result = md.convert("presentation.pptx")  # Images described with LLM
    

    See references/advanced_integrations.md for integration details.

    6. Batch Processing

    Process multiple files or entire ZIP archives at once.

    ZIP file processing:

    from markitdown import MarkItDown
    
    md = MarkItDown()
    result = md.convert("archive.zip")
    print(result.text_content)  # All files converted and concatenated
    

    Batch script: Use the provided batch processing script for directory conversion:

    python scripts/batch_convert.py /path/to/documents /path/to/output
    

    See scripts/batch_convert.py for implementation details.

    Installation

    Full installation (all features):

    uv pip install 'markitdown[all]'
    

    Modular installation (specific features):

    uv pip install 'markitdown[pdf]'           # PDF support
    uv pip install 'markitdown[docx]'          # Word support
    uv pip install 'markitdown[pptx]'          # PowerPoint support
    uv pip install 'markitdown[xlsx]'          # Excel support
    uv pip install 'markitdown[audio]'         # Audio transcription
    uv pip install 'markitdown[youtube]'       # YouTube transcripts
    

    Requirements:

    • Python 3.10 or higher

    Output Format

    MarkItDown produces clean, token-efficient Markdown optimized for LLM consumption:

    • Preserves headings, lists, and tables
    • Maintains hyperlinks and formatting
    • Includes metadata where relevant (EXIF, document properties)
    • No temporary files created (streaming approach)

    Common Workflows

    Preparing documents for RAG:

    from markitdown import MarkItDown
    
    md = MarkItDown()
    
    # Convert knowledge base documents
    docs = ["manual.pdf", "guide.docx", "faq.html"]
    markdown_content = []
    
    for doc in docs:
        result = md.convert(doc)
        markdown_content.append(result.text_content)
    
    # Now ready for embedding and indexing
    

    Document analysis pipeline:

    # Convert all PDFs in directory
    for file in documents/*.pdf; do
        markitdown "$file" -o "markdown/$(basename "$file" .pdf).md"
    done
    

    Plugin System

    MarkItDown supports extensible plugins for custom conversion logic. Plugins are disabled by default for security:

    from markitdown import MarkItDown
    
    # Enable plugins if needed
    md = MarkItDown(enable_plugins=True)
    

    Resources

    This skill includes comprehensive reference documentation for each capability:

    • references/document_conversion.md - Detailed PDF, DOCX, PPTX, XLSX conversion options
    • references/media_processing.md - Image OCR and audio transcription details
    • references/web_content.md - HTML, YouTube, and EPUB extraction
    • references/structured_data.md - CSV, JSON, XML conversion formats
    • references/advanced_integrations.md - Azure Document Intelligence and LLM integration
    • scripts/batch_convert.py - Batch processing utility for directories

    Related skills

    r-reproducibility-guideAnswering Research QuestionsBuilding Paper Screening RubricsChina-CF-StudyCleaning Up Research Sessions